Table of Contents

Poznámky ze společných schůzek

Software Perfusní analýza DCE-MRI

Termíny dovolených

Jirka K

23.7. - 27.7.

Harabiš

Už byl :-)

Ondra

21.7. - 11.8.

Radovan

4.-18.8.

Martin

16.8.-7.9.

Konzultace s Kimem 16.2.2012

Poznámka

Všechno vzniklo během dnešní konzultace s Kimem, kdy Kim na svém laptopu klikal a sděloval a konzultoval nedostatky. Berte to s rezervou, ale bylo by dobré, kdyby to fungovalo.

Jednotlivé bloky

Import
Manual Registration
Automatic Registration
Conversion to concentration
ROI tracking
Tissue selection
Perfusion analysis
Scaling
Visualization
Chybové hlášky

Chyba č. 1 ??? Error using =⇒ minus Matrix dimensions must agree.

Error in =⇒ gui_tissue_selection>subtract_baseline at 880 

          roi_0 = roi_0 - baseline;

Error in =⇒ gui_tissue_selection>b8_add at 377 

          roi_0 = subtract_baseline(data{end}.info, roi_0);

??? Error while evaluating uicontrol Callback

Chyba č. 2 Error: File: gui_registration.m Line: 1009 Column: 1 The function “pushbutton14_Callback” was closed with an 'end', but at least one other function definition was not. To avoid confusion when using nested functions, it is illegal to use both conventions in the same file.

Error in main/Registration_fcn (line 95) 

      gui_registration

Chyba č. 3

Error while evaluating uicontrol Callback [10:14:23] Kim Nylund: Error in impoly>impolyAPI/getVertexContextMenu (line 490) 

      vertex_cmenu = get(getVertexHGGroup(h_vertices{1}),'UIContextMenu');

Error in impoly>impolyAPI/setColor (line 449) 

          updateColorContextMenu(getVertexContextMenu(),color);

Error in createROIContextMenu (line 35) setColor(color_choices(1).Color);

Error in impoly>impolyAPI/createVertexContextMenu (line 746) 

      vertex_cmenu = createROIContextMenu(h_fig,getPosition,@setColor);

Error in impoly>impolyAPI (line 284) 

cmenu_vertices = createVertexContextMenu();

Error in impoly (line 97) 

          [h_group,draw_api] = impolyAPI(varargin{:});

Error in iptui.roiPolygon (line 11) 

          obj = obj@impoly(h_parent,[]);

Error in createWaitModePolygon (line 18) h_poly = iptui.roiPolygon(h_ax,finished_cmenu_text);

Error in roipoly>parse_inputs (line 173) 

  [xi,yi,placement_cancelled] = createWaitModePolygon(gca,cmenu_text);

Error in roipoly (line 81) [xdata,ydata,num_rows,num_cols,xi,yi,placement_cancelled] = parse_inputs(varargin{:});

Error in gui_conversion_simple/butt_flash (line 352) 

      [BW,x_vect,y_vect]=roipoly();

Chyba č. 4 ??? Error using =⇒ get Invalid handle object.

Error in =⇒ imagemodel.imagemodel>imagemodel.getClassType at 351 

              imageclass = class(get(imgmodel.ImageHandle,'CData'));

Error in =⇒ imagemodel.imagemodel>imagemodel.getNumberFormatFcn at 579 

          imageClass = getClassType(imgmodel);

Error in =⇒ imagemodel.imagemodel>imagemodel.getDataFromImageTypeFormatter at 850 

          [formatNumber, containsFloat] = getNumberFormatFcn(imgmodel);

Error in =⇒ imagemodel.imagemodel>imagemodel.getDefaultPixelInfoString at 374 

          string = getDataFromImageTypeFormatter(imgmodel,'DefaultPixelInfoString');

Error in =⇒ impixelinfoval2>displayPixelInfo/displayDefaultString at 178 

             defaultPixelInfoString = getDefaultPixelInfoString(imageModels);

Error in =⇒ impixelinfoval2>displayPixelInfo at 86 

         displayDefaultString;

Error in =⇒ iptaddcallback2>callbackProcessor at 150 

                  fun(varargin{:});

Error in =⇒ iptaddcallback>callbackProcessor at 150 

                  fun(varargin{:});

??? Error while evaluating figure WindowButtonMotionFcn

Chyba č. 5 ??? Error using =⇒ optimset at 242 Invalid value for OPTIONS parameter Display: must be 'off','on','iter', 'iter-detailed','notify','notify-detailed','final', or 'final-detailed'.

Error in =⇒ deconv_bolusburst_paramtrf_completeparamAIF_v3 at 379 options=optimset('TolX',1e-20,'TolFun',1e-20,'Display','no','DiffMinChange',1e-20,'DiffMaxChange',1e-10,'HessUpdate','bfgs','MaxFunEvals',1e10,…

Error in =⇒ gui_perfan>start_analysis at 794 

                  [model, betainv, mtt,v,f,delay,precision,trf_out,aif_out, k1, s1, mu1, k2, s2, mu2,
                  shift] = deconv_bolusburst_paramtrf_completeparamAIF_v3(tis,Ts, edge_start, flash1,
                  flash2, fla

??? Error while evaluating uicontrol Callback

Chyba č. 6 ??? Reference to non-existent field 'acq'.

Error in =⇒ roi_track>b1_browse at 113 

                  if ~isfield(data{end}.info.acq,'precontrast')

??? Error while evaluating uicontrol Callback

Bergen 17.-27.9.2011

Před

pondělí 12.9.2011

Organizační věci
Nová data z MOU

17.8.2011 Intallation of our dce-us soft at Kim's comp.

středa 27.7.2011

čtvrtek 21.7.2011

Poznámky k jednotlivým blokům softwaru:

Nevím, kdo sem tu chybu postnul, nějak se v té wiki nevyznám ještě. Tohle není chyba browseru, tohle je chyba jeho obsluhy - ta delete funkce musí být volána dřív než jsou vymazány globální handles. Martin M. ??? Error using =⇒ set Invalid handle object.

Error in =⇒ dot_operations_new_structure>delete_callback at 53 

      set(source,'Value',0) % untoggle button for dot
      operations

??? Error using =⇒ delete Error while evaluating figure DeleteFcn

Přehled cen snídaní

snídaně 1 snídaně 2 snídaně 3 snídaně 4
Radim 300,- 300,-
Radovan 300,- 300,-
Vráťa ? ?
Martin 250,- 200,- 300,-
Jirka 384,- 190,- (30.10.2012)
Vláďa 300,- 300,-
Ondra 246,- 300,- (17.07.2012) 311,- (11.4.2013) 25.6.2014
Lucka 385,- 435,- (25.2.2013)
Honza 280,-

3.9.2013 v 8:30 má snídani: Vláďa 8-)